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Oryza Tag Line consists
in a searchable database
integrating phenotypic data resulting from the evaluation
of the Génoplante rice insertion line library. To display the sequence information (Flanking
Sequence Tags) resulting from the molecular characterization of the
mutagen insertion sites in the collection, Oryza Tag
Line is linked to OryGenesDB a GGB-derived interface. Aside from generic data ( production record and seed stock ) Oryza Tag Line includes textual and pictorial information resulting from the following observations: (i.) GUS/GFP expression assays conducted on the primary transformants (T0) and/or T1 progenies (ii.) morpho-physiological alterations detected during the growth of the T1 progenies either in phytotron -up to the 5-6 leaf stage- or under agronomical conditions in the field (collaboration with CIAT, Cali, Colombia). Other phenotype information will be integrated in the future including: (i.) reporter gene expression in mature seed and changes in seed morphology detected during the systematic screening of the panicles harvested on T0 and T1 plants. (ii.) changes observed in the response to inoculation with Magnaporthe grisea. For these observations, we use the controlled vocabulary from Plant Ontology and Gene Ontology.
Access to FST information through OrygenesDB We hope you will enjoy using this site ! Please feel free to contact
us if you have any suggestions or questions
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